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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2838990_2844067_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2838990 - 2844067

Intron Length:

5078

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGTGGG

5'SS Class:

major

3'SS Sequence:

GCTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAC

U12 Branch Point Sequence:

TTACGCTCAATT

Flanking Amino Acid:

FIPVLPFILEIFQQVDFNKR

Intron Amino Acid Position:

500

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.3

67.1

44.6

Major BPS

68.9

0.47

59.6

38.6

Major PPT

82.9

0.74

0.8

76.8

31.8

Minor 5ss

27.5

-2.6

2.9

32.4

42.2

Minor BPS

53.3

0.18

74.83

41.9

Associated Gene:

Gene:

NOC2L

Ensembl Gene ID:

ENSAPLG00000008755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040219

2823735 - 2857128

33394

ENSAPLT00000018541

2837011 - 2857128

20118

ENSAPLT00000009135

2823937 - 2857128

33192