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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2844180_2848223_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2844180 - 2848223

Intron Length:

4044

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTAATAT

U12 Branch Point Sequence:

CCTGGCCTAATA

Flanking Amino Acid:

PLTQVIIGCIKLVPTARFYP

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

55.2

0.13

1.2

41.2

Major PPT

82.4

0.73

0.7

74.9

30.4

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

-0.3

2.1

54.96

44.6

Associated Gene:

Gene:

NOC2L

Ensembl Gene ID:

ENSAPLG00000008755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040219

2823735 - 2857128

33394

ENSAPLT00000018541

2837011 - 2857128

20118

ENSAPLT00000009135

2823937 - 2857128

33192