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Intron Name: Anas_platyrhynchos_platyrhynchos_22_285097_285673_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

285097 - 285673

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAC

U12 Branch Point Sequence:

GTAACATTAGTT

Flanking Amino Acid:

SHVLKGFLNKDPKERLGCQP

Intron Amino Acid Position:

496

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.9

0.89

0.9

83.8

27.2

Major BPS

65.7

0.39

1.2

67.4

36.7

Major PPT

92.4

0.95

0.7

88.3

28.9

Minor 5ss

35.4

-1.7

2.8

44.9

43.2

Minor BPS

49.3

0.02

1.9

68.21

42.1

Associated Gene:

Gene:

PRKCZ

Ensembl Gene ID:

ENSAPLG00000010027

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010479

249611 - 293056

43446

ENSAPLT00000040721

265744 - 292632

26889