Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_2864512_2864688_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2864512 - 2864688

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGA|GCAAGTAGT

5'SS Class:

major

3'SS Sequence:

GTGTTGCCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGGCAAT

U12 Branch Point Sequence:

ATCCCGCTGAGG

Flanking Amino Acid:

CSPYFHAMFTNEMSESRQTH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.3

77.3

37.4

Major BPS

45.2

-0.3

1.4

48.2

43.5

Major PPT

68.2

0.41

58.5

43.1

Minor 5ss

28.4

-2.5

3.8

38.9

40.3

Minor BPS

37.3

-1.1

2.4

42.9

42.4

Associated Gene:

Gene:

KLHL17

Ensembl Gene ID:

ENSAPLG00000008387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008709

2864262 - 2870749

6488