Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_2865446_2866222_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2865446 - 2866222

Intron Length:

777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

CCTTTTCCATCC

Flanking Amino Acid:

EEFMLLPLKQVLDLISSDSL

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

37.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

79.1

0.66

0.7

25.2

Minor 5ss

31.6

-2.1

3.2

41.1

45.6

Minor BPS

41.3

-0.6

1.9

50.01

41.2

Associated Gene:

Gene:

KLHL17

Ensembl Gene ID:

ENSAPLG00000008387

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008709

2864262 - 2870749

6488