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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2874529_2876471_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2874529 - 2876471

Intron Length:

1943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGGGCA

5'SS Class:

major

3'SS Sequence:

TGTTTGCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAGAAA

U12 Branch Point Sequence:

TTGGCCAAAAGT

Flanking Amino Acid:

MLTPTRVTADG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

64.5

Major BPS

45.4

-0.2

1.4

42.2

Major PPT

78.9

0.65

0.9

73.2

37.2

Minor 5ss

24.2

-3

3.2

26.5

Minor BPS

45.5

-0.2

2.3

68.22

48.3

Associated Gene:

Gene:

PLEKHN1

Ensembl Gene ID:

ENSAPLG00000008187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008495

2874526 - 2893277

18752