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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2877926_2881495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2877926 - 2881495

Intron Length:

3570

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

ATCCTTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

TTCTCCTGAATC

Flanking Amino Acid:

DKILQYIPGKHFQNQENQKE

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.7

90.3

25.3

Major BPS

0.72

38.9

Major PPT

0.56

0.8

68.9

Minor 5ss

25.8

-2.8

3.6

36.7

40.4

Minor BPS

74.1

0.74

1.4

79.19

36.3

Associated Gene:

Gene:

PLEKHN1

Ensembl Gene ID:

ENSAPLG00000008187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043567

2876221 - 2893277

17057

ENSAPLT00000008500

2876221 - 2892895

16675

ENSAPLT00000008495

2874526 - 2893277

18752