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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2881643_2881791_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2881643 - 2881791

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCAC

5'SS Class:

strong_major

3'SS Sequence:

GTATTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

CTCCCCCAAAAT

Flanking Amino Acid:

KVKLKLQHCQEVNDCYLELF

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

74.7

35.6

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

82.7

0.74

0.9

77.5

36.6

Minor 5ss

33.9

-1.8

43.8

43.9

Minor BPS

45.1

-0.2

2.1

63.25

46.4

Associated Gene:

Gene:

PLEKHN1

Ensembl Gene ID:

ENSAPLG00000008187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008500

2876221 - 2892895

16675

ENSAPLT00000008495

2874526 - 2893277

18752

ENSAPLT00000043567

2876221 - 2893277

17057