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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2881873_2882683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2881873 - 2882683

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCGG

5'SS Class:

major

3'SS Sequence:

CCTTCTCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGATAAT

U12 Branch Point Sequence:

TGTCCCCCAAGA

Flanking Amino Acid:

SMGFNGLTYQGLLPLKELNV

Intron Amino Acid Position:

177

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

1.1

55.2

Major BPS

63.8

0.34

1.2

64.1

39.8

Major PPT

77.5

0.62

0.9

72.5

32.2

Minor 5ss

28.8

-2.4

3.4

38.1

46.9

Minor BPS

46.5

-0.2

2.1

63.2

42.3

Associated Gene:

Gene:

PLEKHN1

Ensembl Gene ID:

ENSAPLG00000008187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043567

2876221 - 2893277

17057

ENSAPLT00000008500

2876221 - 2892895

16675

ENSAPLT00000008495

2874526 - 2893277

18752