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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2882772_2885494_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2882772 - 2885494

Intron Length:

2723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGTGCC

5'SS Class:

major

3'SS Sequence:

TCATTTCTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAT

U12 Branch Point Sequence:

GTGCCCTTATCT

Flanking Amino Acid:

GQEDHAFRITGPLLNPLIVF

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.3

70.3

35.3

Major BPS

86.1

0.9

0.7

85.7

22.9

Major PPT

80.4

0.68

0.8

37.1

Minor 5ss

-2.5

3.2

40.9

Minor BPS

65.4

0.56

1.7

78.51

43.3

Associated Gene:

Gene:

PLEKHN1

Ensembl Gene ID:

ENSAPLG00000008187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043567

2876221 - 2893277

17057

ENSAPLT00000008500

2876221 - 2892895

16675

ENSAPLT00000008495

2874526 - 2893277

18752