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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2886839_2889609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2886839 - 2889609

Intron Length:

2771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTCCGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAG

U12 Branch Point Sequence:

GTGCGCTCAGCC

Flanking Amino Acid:

SEEHNSFYFKGELPLNAIQV

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

1.2

77.7

33.5

Major BPS

47.4

-0.1

1.6

54.7

43.1

Major PPT

71.7

0.49

0.9

65.4

36.2

Minor 5ss

35.9

-1.6

2.6

42.5

44.2

Minor BPS

43.1

-0.5

2.1

53.13

Associated Gene:

Gene:

PLEKHN1

Ensembl Gene ID:

ENSAPLG00000008187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043567

2876221 - 2893277

17057

ENSAPLT00000008500

2876221 - 2892895

16675

ENSAPLT00000008495

2874526 - 2893277

18752