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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2892351_2892478_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2892351 - 2892478

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTGAGTCGT

5'SS Class:

major

3'SS Sequence:

TTGTCCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

CATATTTTATTT

Flanking Amino Acid:

PPADAPYLAGVSSLLEEHLG

Intron Amino Acid Position:

581

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.8

0.33

1.3

59.7

46.7

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

85.2

0.79

0.8

77.2

Minor 5ss

31.4

-2.1

36.7

40.5

Minor BPS

49.9

0.07

1.6

64.72

40.6

Associated Gene:

Gene:

PLEKHN1

Ensembl Gene ID:

ENSAPLG00000008187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008495

2874526 - 2893277

18752

ENSAPLT00000043567

2876221 - 2893277

17057