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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2892528_2892704_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2892528 - 2892704

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACCC

5'SS Class:

strong_major

3'SS Sequence:

TGGCTTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTCCAA

U12 Branch Point Sequence:

AGCTCTCCAAGC

Flanking Amino Acid:

EHLGPLLQPPGDSSGAYDLP

Intron Amino Acid Position:

597

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

68.6

36.5

Major BPS

55.5

0.14

1.3

66.7

39.7

Major PPT

79.2

0.66

0.9

73.2

37.2

Minor 5ss

27.8

-2.5

2.9

34.2

41.4

Minor BPS

42.5

-0.5

50.27

40.3

Associated Gene:

Gene:

PLEKHN1

Ensembl Gene ID:

ENSAPLG00000008187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043567

2876221 - 2893277

17057

ENSAPLT00000008495

2874526 - 2893277

18752