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Intron Name: Anas_platyrhynchos_platyrhynchos_22_2984594_2984696_R

Intron Information:

Intron Rank:

135743

Intron Class:

major

Intron Phase:

Intron Coordinates:

2984594 - 2984696

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCCCAG

U12 Branch Point Sequence:

CCGTCCCCAGCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

70.9

36.4

Major BPS

44.4

-0.3

1.6

54.3

42.9

Major PPT

85.6

0.8

0.7

80.7

24.6

Minor 5ss

24.6

-2.9

28.8

43.6

Minor BPS

43.5

-0.5

2.1

52.08

45.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020420

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021983

2984236 - 2989816

5581