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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3114436_3116441_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3114436 - 3116441

Intron Length:

2006

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTACT

5'SS Class:

major

3'SS Sequence:

CTTTTTTCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

GCGTTGTGATCT

Flanking Amino Acid:

EVASKSTESSVPEAECCVDT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

75.7

40.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

84.6

0.78

0.6

84.9

22.7

Minor 5ss

37.5

-1.4

3.1

52.7

Minor BPS

41.7

-0.5

2.2

56.58

45.9

Associated Gene:

Gene:

C1orf159

Ensembl Gene ID:

ENSAPLG00000002131

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002297

3110370 - 3125157

14788