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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3150844_3170642_F

Intron Information:

Intron Rank:

148221

Intron Class:

major

Intron Phase:

Intron Coordinates:

3150844 - 3170642

Intron Length:

19799

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTTCTCAGACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

26.3

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

86.9

0.83

0.7

80.6

31.5

Minor 5ss

36.1

-1.6

3.3

49.4

41.3

Minor BPS

53.7

0.1

74.26

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044691

3150818 - 3172976

22159