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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3155879_3170642_F

Intron Information:

Intron Rank:

148222

Intron Class:

major

Intron Phase:

Intron Coordinates:

3155879 - 3170642

Intron Length:

14764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCAT

5'SS Class:

major

3'SS Sequence:

TCTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TTTTCTCAGACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

63.1

42.9

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

86.9

0.83

0.7

80.6

31.5

Minor 5ss

30.7

-2.2

3.6

46.8

48.5

Minor BPS

53.7

0.1

74.26

36.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029817

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046552

3155802 - 3172976

17175