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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3212509_3215190_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
3212509 - 3215190

Intron Length:
2682

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTGATTCTT

5'SS Class:
strong_major

3'SS Sequence:
TTAATTTTTGCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
AGTTTCTCAATT

Flanking Amino Acid:
QRAQALSAGRAISTASELEL

Intron Amino Acid Position:
210

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.6
0.77
0.9
79.8
35.1

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
85.7
0.8
0.8
80.9
36.3

Minor 5ss
34.8
-1.7
3.1
50.1
46.1

Minor BPS
66.3
0.59
1.5
79.22
36.8

Associated Gene:

Gene:
TTLL10

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3209323 - 3227605
18283

3207564 - 3227605
20042