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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3217233_3217892_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
3217233 - 3217892

Intron Length:
660

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTAAGAACT

5'SS Class:
strong_major

3'SS Sequence:
GATTTTCCCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
TTGTGTTTGATT

Flanking Amino Acid:
MKKVGRSSNSKLLKMEEFFP

Intron Amino Acid Position:
345

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.9
0.78
0.9
80.9
31

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
71.8
0.49
0.8
66.1
35.6

Minor 5ss
37.8
-1.4
3
51.4
38.8

Minor BPS
60.2
0.4
1.8
78.01
39.5

Associated Gene:

Gene:
TTLL10

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3209323 - 3227605
18283

3207564 - 3227605
20042