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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_3221923_3226161_F

Intron Information:

Intron Rank:
11
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
3221923 - 3226161
Intron Length:
4239

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTATGACTA
5'SS Class:
strong_major
3'SS Sequence:
TCATCTTTCCTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TGTTCAT
U12 Branch Point Sequence:
CTTTCCTGATTG
Flanking Amino Acid:
CDFLIDENFKVWLLEMNANP
Intron Amino Acid Position:
575

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83.2
0.78
0.9
73.4
37.3
Major BPS
84.8
0.86
1
85.7
34.9
Major PPT
75.7
0.58
0.8
69.2
36.7
Minor 5ss
41.6
-0.9
3.1
56.3
47.8
Minor BPS
55.9
0.05
1.8
63.99
44.3

Associated Gene:

Gene:
TTLL10
Ensembl Gene ID:
ENSAPLG00000002326
Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000023251
3209323 - 3227605
18283
ENSAPLT00000002333
3207564 - 3227605
20042