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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3255469_3255873_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3255469 - 3255873

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

GCTAACTGAACT

Flanking Amino Acid:

MPDDRYPLGSVCLPCPEGFY

Intron Amino Acid Position:

148

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.7

34.9

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

39.7

-1.2

2.8

46.1

43.6

Minor BPS

55.4

0.25

1.7

71.98

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042180

3252368 - 3258103

5736

ENSAPLT00000021214

3252368 - 3259117

6750

ENSAPLT00000002776

3252368 - 3259979

7612