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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3256447_3257614_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3256447 - 3257614

Intron Length:

1168

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAGGTGGT

5'SS Class:

major

3'SS Sequence:

TGGCCTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TAACGATCAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

69.1

41.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

75.5

0.57

0.9

73.3

37.1

Minor 5ss

35.4

-1.7

3.6

52.7

44.8

Minor BPS

43.7

-0.3

2.1

61.52

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042180

3252368 - 3258103

5736