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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3263094_3264110_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3263094 - 3264110

Intron Length:

1017

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTGTCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

GGTTATTGAAAA

Flanking Amino Acid:

DGIVTMEELEEYMDPMNEYN

Intron Amino Acid Position:

299

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

81.3

32.8

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

82.7

0.74

0.8

77.1

37.1

Minor 5ss

33.3

-1.9

43.8

43.9

Minor BPS

48.8

-0

1.7

60.65

38.3

Associated Gene:

Gene:

SDF4

Ensembl Gene ID:

ENSAPLG00000002823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028337

3262917 - 3285632

22716

ENSAPLT00000002868

3262847 - 3277161

14315