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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3264287_3265385_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3264287 - 3265385

Intron Length:

1099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGCTAT

5'SS Class:

weak_major

3'SS Sequence:

ACTTCTGTTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCCAT

U12 Branch Point Sequence:

TTTCCATGTACT

Flanking Amino Acid:

FMVKEIIRDLDQDGDKKLTL

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.1

67.6

40.3

Major BPS

77.3

0.68

1.2

86.7

32.3

Major PPT

0.56

0.9

69.6

36.1

Minor 5ss

54.2

0.14

2.5

64.2

47.3

Minor BPS

51.7

0.13

2.1

80.41

40.5

Associated Gene:

Gene:

SDF4

Ensembl Gene ID:

ENSAPLG00000002823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028337

3262917 - 3285632

22716

ENSAPLT00000002868

3262847 - 3277161

14315