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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3265545_3268114_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3265545 - 3268114

Intron Length:

2570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTAAATTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TCTACCTTAAAC

Flanking Amino Acid:

NNEELKIDEETQEVLDNLKD

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.81

0.9

75.2

35.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.1

0.5

0.9

62.7

42.9

Minor 5ss

33.8

-1.8

3.2

40.4

Minor BPS

72.4

0.68

1.4

76.65

39.1

Associated Gene:

Gene:

SDF4

Ensembl Gene ID:

ENSAPLG00000002823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028337

3262917 - 3285632

22716

ENSAPLT00000002868

3262847 - 3277161

14315