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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3268229_3268715_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3268229 - 3268715

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

TTCTCTCTTACA

Flanking Amino Acid:

HFRAVDPDGDGHVSWDEYKI

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

64.3

41.6

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

88.9

0.88

0.6

83.7

24.6

Minor 5ss

31.4

-2.1

3.1

36.3

41.6

Minor BPS

0.15

71.9

40.1

Associated Gene:

Gene:

SDF4

Ensembl Gene ID:

ENSAPLG00000002823

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028337

3262917 - 3285632

22716

ENSAPLT00000002868

3262847 - 3277161

14315