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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3341655_3342256_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3341655 - 3342256

Intron Length:

602

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TCCTTCTTATTC

Flanking Amino Acid:

VYVHGLLQLQAGQYTSIFVD

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.2

1.11

0.7

90.9

28.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

83.6

0.76

0.8

77.9

30.1

Minor 5ss

40.2

-1.1

3.1

58.6

45.9

Minor BPS

59.5

0.28

1.6

64.92

41.8

Associated Gene:

Gene:

C1QTNF12

Ensembl Gene ID:

ENSAPLG00000003073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003116

3340605 - 3365325

24721