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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3352703_3364056_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3352703 - 3364056

Intron Length:

11354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACGTCAT

U12 Branch Point Sequence:

GCAACGTCATCA

Flanking Amino Acid:

NSEELHGHPKILESPDPRIT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

63.4

0.33

1.2

65.3

41.5

Major PPT

87.6

0.85

0.7

85.4

29.3

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

39.1

-0.8

2.3

46.07

42.8

Associated Gene:

Gene:

C1QTNF12

Ensembl Gene ID:

ENSAPLG00000003073

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003116

3340605 - 3365325

24721