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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3371733_3373197_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3371733 - 3373197

Intron Length:

1465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTGCAGACTT

Flanking Amino Acid:

FCELFPEVVEEIKQKQKAQE

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

89.7

0.89

0.6

82.1

29.9

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

43.5

-0.4

2.2

68.1

42.9

Associated Gene:

Gene:

UBE2J2

Ensembl Gene ID:

ENSAPLG00000003153

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003202

3371415 - 3375357

3943