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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3397059_3398488_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3397059 - 3398488

Intron Length:

1430

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTTAT

U12 Branch Point Sequence:

TTATGCTGAATG

Flanking Amino Acid:

KRQSRVGFKLCNATGGNCFY

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

66.2

0.4

1.3

57.4

49.1

Major PPT

89.9

0.9

0.6

83.9

31.1

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

55.6

0.04

65.17

42.8

Associated Gene:

Gene:

SCNN1D

Ensembl Gene ID:

ENSAPLG00000003451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003531

3395646 - 3404308

8663