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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3399949_3400354_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3399949 - 3400354

Intron Length:

406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTGTGGTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

AAATTGTTACAA

Flanking Amino Acid:

WTATKPGIPYGLSLILRAEQ

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.8

32.5

Major BPS

65.7

0.39

71.3

30.3

Major PPT

75.4

0.57

67.9

42.5

Minor 5ss

46.7

-0.3

2.5

57.4

41.8

Minor BPS

42.9

-0.5

2.2

52.62

39.1

Associated Gene:

Gene:

SCNN1D

Ensembl Gene ID:

ENSAPLG00000003451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003531

3395646 - 3404308

8663