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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3400519_3401032_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3400519 - 3401032

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGTCAC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTGTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

AAGCTTCTAATC

Flanking Amino Acid:

GIATTIGIQQDEVNRLGGNY

Intron Amino Acid Position:

346

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

1.1

73.5

37.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

74.6

0.55

0.9

68.2

37.6

Minor 5ss

30.9

-2.2

2.7

35.9

40.8

Minor BPS

46.8

-0.2

1.5

51.5

33.1

Associated Gene:

Gene:

SCNN1D

Ensembl Gene ID:

ENSAPLG00000003451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003531

3395646 - 3404308

8663