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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3401132_3401727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3401132 - 3401727

Intron Length:

596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTGTCA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCCTTTTTT

Flanking Amino Acid:

LLYNNSYTLQACLHSCFQHI

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

63.8

36.5

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

43.2

-0.7

47.2

Minor BPS

48.5

-0

3.6

87.87

37.8

Associated Gene:

Gene:

SCNN1D

Ensembl Gene ID:

ENSAPLG00000003451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003531

3395646 - 3404308

8663