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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3402086_3402419_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3402086 - 3402419

Intron Length:

334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGTCAC

5'SS Class:

major

3'SS Sequence:

TTTATTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTAACA

Flanking Amino Acid:

NCFDQCPKPCRESLYKVSAG

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

1.1

63.6

42.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.3

0.77

0.9

81.1

35.2

Minor 5ss

33.6

-1.9

3.2

44.4

43.5

Minor BPS

77.6

0.86

1.1

83.48

30.3

Associated Gene:

Gene:

SCNN1D

Ensembl Gene ID:

ENSAPLG00000003451

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003531

3395646 - 3404308

8663