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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3495863_3496923_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3495863 - 3496923

Intron Length:

1061

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTAATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GCATGTTTAATT

Flanking Amino Acid:

ERDLCWAPPGGYLDVPAMQD

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

71.1

40.4

Major BPS

81.8

0.79

1.1

34.5

Major PPT

82.1

0.72

0.9

78.9

38.5

Minor 5ss

32.6

-2

3.1

35.3

41.4

Minor BPS

56.8

0.29

1.8

68.89

42.7

Associated Gene:

Gene:

PUSL1

Ensembl Gene ID:

ENSAPLG00000004946

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032097

3485845 - 3504236

18392

ENSAPLT00000005110

3485845 - 3504236

18392