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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3514081_3514168_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3514081 - 3514168

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTGAC

U12 Branch Point Sequence:

AAATATCTGACA

Flanking Amino Acid:

MHGTLIMKDNSFRLVSSEQA

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

83.5

27.9

Major BPS

72.6

0.56

0.9

63.1

35.8

Major PPT

86.2

0.81

0.7

24.1

Minor 5ss

38.5

-1.3

2.8

50.4

39.3

Minor BPS

46.5

-0.2

1.8

56.15

35.9

Associated Gene:

Gene:

INTS11

Ensembl Gene ID:

ENSAPLG00000005238

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005480

3512685 - 3521548

8864