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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3549509_3549993_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
3549509 - 3549993

Intron Length:
485

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTGAGCATA

5'SS Class:
major

3'SS Sequence:
TCTTTATTCCTAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TCTTTAT

U12 Branch Point Sequence:
TTTTCTTTATTC

Flanking Amino Acid:
RVLREIVSKPGPISLTVAKC

Intron Amino Acid Position:
332

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.3
0.67
1
74.1
38.4

Major BPS
83.9
0.84
1
73.9
41.3

Major PPT
80.1
0.68
0.8
73.7
35.9

Minor 5ss
37.1
-1.5
3
40.3
45.6

Minor BPS
73.1
0.7
1.5
81.83
32.8

Associated Gene:

Gene:
DVL1

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3537630 - 3609023
71394