Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_22_3622615_3623285_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3622615 - 3623285

Intron Length:

671

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGCATC

5'SS Class:

major

3'SS Sequence:

CTCCCTTATACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GCTGTCTGAATT

Flanking Amino Acid:

TQYRSEDIRLDYKNNILKEK

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.57

1.1

68.8

42.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

77.1

0.61

0.8

71.8

31.7

Minor 5ss

49.6

-0

2.5

60.9

43.9

Minor BPS

55.7

0.26

1.6

68.72

42.7

Associated Gene:

Gene:

MXRA8

Ensembl Gene ID:

ENSAPLG00000006806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007075

3621626 - 3632113

10488