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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3631204_3631755_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
3631204 - 3631755

Intron Length:
552

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTCGGC

5'SS Class:
major

3'SS Sequence:
TCCGTTGCCCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CATTCAT

U12 Branch Point Sequence:
GAACCATTCATC

Flanking Amino Acid:
TDGNFSLVIKDVAESDGGIY

Intron Amino Acid Position:
120

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.5
0.41
1.1
54.5
43.3

Major BPS
79.8
0.74
0.9
81.3
29.9

Major PPT
65.3
0.34
0.9
57.4
38.6

Minor 5ss
35.7
-1.6
3.5
50.8
45.8

Minor BPS
45
-0.4
1.9
52.37
38.2

Associated Gene:

Gene:
MXRA8

Ensembl Gene ID:

Chromosome:
22

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3621626 - 3632113
10488