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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3653351_3653838_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3653351 - 3653838

Intron Length:

488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAGAA

U12 Branch Point Sequence:

TTTCTCTCAAAG

Flanking Amino Acid:

SRLLKASRVAGHLLPRSVSS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

69.5

41.5

Major BPS

57.4

0.18

1.1

54.9

40.8

Major PPT

0.61

78.7

27.5

Minor 5ss

31.4

-2.1

3.2

40.6

45.6

Minor BPS

56.9

0.08

1.7

66.47

40.8

Associated Gene:

Gene:

AURKAIP1

Ensembl Gene ID:

ENSAPLG00000006914

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007181

3652312 - 3653890

1579