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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3672325_3673191_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3672325 - 3673191

Intron Length:

867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTCCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TCTTTCTTCCCC

Flanking Amino Acid:

SPSRSASPKHRKSESYSTSS

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

77.8

36.4

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

80.3

0.68

0.7

74.1

31.1

Minor 5ss

-1

3.1

58.1

46.3

Minor BPS

43.7

-0.5

3.6

69.02

43.1

Associated Gene:

Gene:

CCNL2

Ensembl Gene ID:

ENSAPLG00000007159

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038114

3671970 - 3675746

3777

ENSAPLT00000007461

3671970 - 3680998

9029