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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3673285_3673375_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3673285 - 3673375

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TCTTTTTTTACC

Flanking Amino Acid:

KRTGSNSPVNGIQKGRESRS

Intron Amino Acid Position:

389

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.4

43.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

89.3

0.88

0.7

84.9

29.9

Minor 5ss

36.2

-1.6

3.5

48.3

47.3

Minor BPS

64.7

0.45

1.6

73.48

37.9

Associated Gene:

Gene:

CCNL2

Ensembl Gene ID:

ENSAPLG00000007159

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038114

3671970 - 3675746

3777

ENSAPLT00000007461

3671970 - 3680998

9029