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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3674738_3674824_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3674738 - 3674824

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGTA

5'SS Class:

strong_major

3'SS Sequence:

CCATCCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAT

U12 Branch Point Sequence:

AAAGCCTGAATA

Flanking Amino Acid:

CIYLAARTLEIPLPNRPHWF

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.5

32.8

Major BPS

72.3

0.55

1.2

80.7

33.2

Major PPT

0.61

0.8

73.1

31.5

Minor 5ss

34.5

-1.8

3.4

46.2

49.1

Minor BPS

55.6

0.17

1.5

61.07

38.7

Associated Gene:

Gene:

CCNL2

Ensembl Gene ID:

ENSAPLG00000007159

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007461

3671970 - 3680998

9029

ENSAPLT00000038114

3671970 - 3675746

3777