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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3674925_3677721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3674925 - 3677721

Intron Length:

2797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TGCCCTACAACT

Flanking Amino Acid:

ERNQHLVQTSWNYMNDSLRT

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

34.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.74

0.8

80.2

31.8

Minor 5ss

39.7

-1.2

2.8

46.7

43.9

Minor BPS

48.4

-0

1.8

67.65

42.7

Associated Gene:

Gene:

CCNL2

Ensembl Gene ID:

ENSAPLG00000007159

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007461

3671970 - 3680998

9029