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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3724757_3725404_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3724757 - 3725404

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTCTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGATGAA

U12 Branch Point Sequence:

TGAAGCTGACGT

Flanking Amino Acid:

GLCRMVRMQPATEARGYRHR

Intron Amino Acid Position:

487

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.8

43.8

Major BPS

51.5

0.04

1.2

43.5

39.2

Major PPT

82.8

0.74

0.9

77.1

37.1

Minor 5ss

31.9

-2.1

2.9

41.8

Minor BPS

39.2

-0.7

2.2

55.22

Associated Gene:

Gene:

VWA1

Ensembl Gene ID:

ENSAPLG00000007608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007889

3714394 - 3725445

11052