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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3729838_3730436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3729838 - 3730436

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGCCC

5'SS Class:

major

3'SS Sequence:

CTTATCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

ATCTGCTTATCT

Flanking Amino Acid:

LQLEQQTKLKEYEAAIEQLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

57.6

41.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

85.2

0.79

0.8

76.9

37.2

Minor 5ss

25.5

-2.8

3.2

33.6

41.9

Minor BPS

58.4

0.34

2.1

44.5

Associated Gene:

Gene:

ATAD3A

Ensembl Gene ID:

ENSAPLG00000007627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007948

3729761 - 3754402

24642