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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3734391_3738516_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3734391 - 3738516

Intron Length:

4126

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTTACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTTTCTTAATC

Flanking Amino Acid:

VTDWDKVTATVAGLTLLAVG

Intron Amino Acid Position:

172

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

72.8

39.3

Major BPS

0.92

0.9

86.2

29.1

Major PPT

80.4

0.68

0.8

74.1

35.3

Minor 5ss

-0.9

3.1

57.3

46.8

Minor BPS

1.14

0.8

89.76

24.1

Associated Gene:

Gene:

ATAD3A

Ensembl Gene ID:

ENSAPLG00000007627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007948

3729761 - 3754402

24642