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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3824499_3827948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3824499 - 3827948

Intron Length:

3450

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAG

U12 Branch Point Sequence:

CTTCAGTGAATT

Flanking Amino Acid:

EKDNEVTNLQDTVFKLREES

Intron Amino Acid Position:

173

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

63.4

0.33

1.6

73.6

41.8

Major PPT

89.3

0.88

0.6

84.5

23.3

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

45.2

-0.2

2.3

67.26

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008788

3813530 - 3839724

26195