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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3832143_3832782_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3832143 - 3832782

Intron Length:

640

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

GCACCATTAAAT

Flanking Amino Acid:

EAQEALNKEKQDSMNRYGAL

Intron Amino Acid Position:

105

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.9

33.4

Major BPS

73.5

0.58

79.3

29.4

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

34.9

-1.7

2.8

43.6

43.5

Minor BPS

51.8

0.13

1.7

66.3

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008453

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008788

3813530 - 3839724

26195