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Intron Name: Anas_platyrhynchos_platyrhynchos_22_3875839_3876405_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3875839 - 3876405

Intron Length:

567

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCTGC

5'SS Class:

strong_major

3'SS Sequence:

CCTCTGTCAAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATTTAG

U12 Branch Point Sequence:

CCTCTGTCAAAA

Flanking Amino Acid:

HGGWNPKMAEFIGQTGTVHR

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.8

41.1

Major BPS

52.4

0.06

1.5

42.8

Major PPT

58.7

0.2

1.1

59.7

34.7

Minor 5ss

51.1

0.04

2.4

67.9

43.4

Minor BPS

41.2

-0.6

2.2

49.5

41.5

Associated Gene:

Gene:

MIB2

Ensembl Gene ID:

ENSAPLG00000010686

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011186

3863623 - 3889389

25767